NeuroPAL_ID is a research tool for performing (semi-)automated detection and identification of neurons in images of NeuroPAL, extracting ID’d neural activity traces from NeuroPAL;GCaMP animals, and uploading these datasets to public repositories.
You can contribute to the project on its repository page.
Installation
- Download the Windows or MacOS release.
- Run the setup file.
- Run NeuroPAL_ID.
Working with NWB Files
NeuroPAL_ID natively supports loading, viewing, editing, and saving data in the NWB format using the ndx-multichannel-volume extension. Future software expansions will build on this support as well.
Click on each of the previews below to view them in full resolution.
Loading NWB Volumes
Loading Activity
Loading Video
Saving NWB files
License
NeuroPAL_ID is available as open source software under CC BY-NC-SA 4.0 terms.